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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs145263552 chr11:10181079 T/C C17orf67 chr17:54869274-54916134:- 0.67 6.1 2.55E-9 Box Plot
BLCA rs1456406 chr4:154818847 A/C C4orf43 chr4:164415673-164441690:+ -0.76 -6.16 1.87E-9 Box Plot
BLCA rs1456910 chr3:66746914 T/C FKBP10 chr17:39968932-39979469:+ 0.26 5.98 5.02E-9 Box Plot
BLCA rs146005594 chr2:215829028 C/T AHR chr7:17338246-17385776:+ -0.61 -5.99 4.85E-9 Box Plot
BLCA rs1461304 chr2:6768204 C/G FGF3 chr11:69624992-69633792:- 0.42 6.01 4.21E-9 Box Plot
BLCA rs146159842 chr15:63911171 C/T VCX chrX:7810303-7812184:+ 0.34 5.98 5.12E-9 Box Plot
BLCA rs146161030 chr2:78269596 GA/G HIST1H4C chr6:26104104-26104538:+ 0.51 6.81 3.82E-11 Box Plot
BLCA rs146435417 chr11:10181082 G/A C17orf67 chr17:54869274-54916134:- 0.67 6.1 2.55E-9 Box Plot
BLCA rs146648626 chr14:39798818 T/C LOC647288 chr13:75811890-75814517:- -0.42 -6.73 6.13E-11 Box Plot
BLCA rs146939709 chr1:35849556 AAAGT/A KRTAP13-1 chr21:31768392-31769140:+ 0.19 6.39 4.93E-10 Box Plot
BLCA rs1469847 chr10:98386433 C/A LILRB1 chr19:55128612-55148979:+ -0.37 -5.97 5.44E-9 Box Plot
BLCA rs1470314 chr15:64113024 C/T VCX chrX:7810303-7812184:+ 0.35 6.07 3.08E-9 Box Plot
BLCA rs147192688 chr11:10181788 TA/T C17orf67 chr17:54869274-54916134:- 0.67 6.1 2.55E-9 Box Plot
BLCA rs147240758 chr10:6836291 G/GAAAA IQGAP2 chr5:75699074-76003957:+ -0.49 -6.18 1.6E-9 Box Plot
BLCA rs147500560 chr13:78511320 T/G CD53 chr1:111415776-111442550:+ 0.2 5.95 5.99E-9 Box Plot